Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSSFYKQRKGKLVCGVVAGLADKYNWDLALSRVLIALILYFTKFGLLLYILLAVFLPYKEDIIETRRQGPRRRKDAEPVDDDGWFW
4BKZ Chain:A ((197-213))
---------------------------------------------GILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSI
General information:
TITO was launched using:
RESULT:
Template:
4BKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9095 for 60 contacts (-151.6/contact) +
2D Compatibility (PS) -1882 + (NN) -1581 + (LL) 4000
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -12608.0 ( -210.13 by residue)
QMean score : 0.931
(partial model without unconserved sides chains):
PDB file :
Tito_4BKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BKZ-query.scw
PDB file :
Tito_Scwrl_4BKZ.pdb
: