Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYKKRRFFMSKNNNTTCLIETAIFAALAMALSMIPDFA-SWFTPSFGAIPLILFALRRGTKYGLFAGLIWGLLHFVLSKVYYLSLSQVFIEYILAFISMGLAGVFSAKFKDALSSSSKTKALSLA--LSGAILATFVRYVWHYIAGVIFWASYAPKGMSATLYSLSVNGTAGLLTLFFVVISIIILVISYPSFFLPKK
4MUU Chain:B ((17-188))
--------------NVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLVAPVSLGIAGLF----------RQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFPKLFIHSN
General information:
TITO was launched using:
RESULT:
Template:
4MUU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194985 for 1349 contacts (-144.5/contact) +
2D Compatibility (PS) -17345 + (NN) -5467 + (LL) 1716
1D Compatibility (HY) -25600 + (ID) 3850
Total energy: -245531.0 ( -182.01 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_4MUU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MUU-query.scw
PDB file :
Tito_Scwrl_4MUU.pdb
: