Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKKTQALIEQYSKSLVEVAIEHKIVEKIQQEVAALIDIFETSELEGVLSSLAVSHDEKQHFVKTLQTSCSTYLVNFLEVIVQNEREALLYPILKSVDQELIKVNGQYPIQITTAVALSPEQKERLFDIA-KTKLALPNGQLVEHIDPSIVGGFVVNANNKVIDASVRNQLHQFKMKLK
4BHL Chain:A ((247-347))
-----------------------------------------TSAVNEIEKRIPFSHHDRLGFL----TFCPTNLGTTVRASVH-----IKLPKLAANEEKLEEVAGKYNLQVRGT--------GGIYDISNKRRMGLTEFQAVKEMEDGILELIKIEKEM-------------------
General information:
TITO was launched using:
RESULT:
Template:
4BHL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37044 for 545 contacts (-68.0/contact) +
2D Compatibility (PS) -9275 + (NN) 1021 + (LL) 7160
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -45738.0 ( -83.92 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_4BHL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BHL-query.scw
PDB file :
Tito_Scwrl_4BHL.pdb
: