Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIFSAIDSKFWASIMENPWMILIHLMDIIIVAVLIYKFIKALAGTKIMSLIQGVILFIIIRFVSEWIGLTTITFLMNQIVTYGVIAGVVIFAPEIRTGLEKFGRTPQLFTQRSQLSSDEKLVDALVKAVAYMSPRKIGALISIERTQ-TLQEYIATGIPLDADISSELLINIFIPNTPLHDGAVIVKD--KKIATACSYLPLSESSSISKEFGTRHRAAIGLSENSDALTVIVSEETGGISVALKGEFLHDLSKDSFEAILRTQLIQNQEENSKLAWYNQLLRRK |
3C1Y Chain:A ((27-181)) | -------------------------------------------------------------------------------------------VPQELIEKIKLISPG-----------------TELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHLVPDPT-IPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86758 for 1129 contacts (-76.8/contact) +
2D Compatibility (PS) -16243 + (NN) -4742 + (LL) 11736
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -106257.0 ( -94.12 by residue)
QMean score : 0.479
|
|
|