Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGIL-NFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQ-VGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
2QHS Chain:A ((21-230)) | --------MEFLVEDLG---LVPYGEAWAYQKRVHREVVAGNRPPTLLLLEHPRVITLGRKATGE-NLLFPESWYRENGFELYWVERGGDVTYHGPGQLVGYPIFPVGR-----EVRRFLRQIEEAIVRVAAGYGISAY-------PTPGYAGVWVGEDKLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIV-----PCGL--------K---GKGVTSLEKLLGRKVPMEEAKARVVAAFAEVFGLRPV------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156193 for 1684 contacts (-92.8/contact) +
2D Compatibility (PS) -22309 + (NN) -8341 + (LL) 4812
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -186531.0 ( -110.77 by residue)
QMean score : 0.349
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