Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWL---GVD--------------EETFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNV--QLTLLVGQYAQKYYLGSSAHKNLTETVKSYKDY----LPD-YLPLVHPSPRNQIWLKKN-PWFEKDLIVDLQKIVADILKD |
1WYW Chain:A ((8-189)) | -------------------AELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHF-WKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTP----------GSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCA---QFPRAQDKVHYYIKLKDLRDQLKGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22976 for 1183 contacts (-19.4/contact) +
2D Compatibility (PS) -16709 + (NN) -5957 + (LL) 1928
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -47964.0 ( -40.54 by residue)
QMean score : 0.300
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