Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
4Q0T Chain:A ((388-430)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LENGKVYTSHSQRTPRDMMGQACLNCHAEWTEDQALYAIDYIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6272 for 197 contacts (31.8/contact) +
2D Compatibility (PS) -4345 + (NN) 387 + (LL) 12684
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 11498.0 ( 58.37 by residue)
QMean score : 0.439
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