Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVIREQEFVNQYHYDARNLEWE--EENGTPKTNFEVTFQLANRDEAAKVT-------SIVAVLQFVIVRDEFVISGVISQMAHIQGRLINEPSEFSQDEVENLAAPLLEIVKRLTYEVTEIALDRPGVTLEFNS |
3H5Y Chain:A ((227-302)) | --IIFERHSRYRYHYDADYSRWDSTQQRAVLAAALEIMVKFSSEPHLAQVVAEDLLSPSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSEVTNLSPDIIQANSLFSFYGDDEIVSTDIKLDPEKLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1265 for 276 contacts (4.6/contact) +
2D Compatibility (PS) -6774 + (NN) 2619 + (LL) 312
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -7178.0 ( -26.01 by residue)
QMean score : 0.071
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