Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIAAMEEELKLLVENLEDKSQETVLSNVYYSGRYGEHELVLVQSGVGKVMSAMSVAILVESFKVDAIINTGSAGAVATGLNVGDVVVADTLVYHDVDLTAFGYDYGQMSMQPLYFHSDKTFVSTFEAVLSKEEMTSKVGLIATGDSFIAGQEKIDVIKGHFPQVLAVEMEGAAIAQAAQATGKPFVVVRAMSDTAAHDANITFDEFIIEAGKRSAQVLMAFLKAL
4F3C Chain:A ((17-245))
MKIGIIGAMEEEVTLLRDKIDNRQTITLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLASTLKVGDIVVSDETRYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAESCIRELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSTLMVETLVQKL
General information:
TITO was launched using:
RESULT:
Template:
4F3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177261 for 2086 contacts (-85.0/contact) +
2D Compatibility (PS) -24716 + (NN) -8210 + (LL) 0
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -234637.0 ( -112.48 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4F3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F3C-query.scw
PDB file :
Tito_Scwrl_4F3C.pdb
: