Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLDLNSVVVHIFSEDERQHYNLEKLWHEAPLLDAEDFMTE
2O5A Chain:B ((3-112))
--NQELLQLAVNAVDDKKAEQVVALNMKGISL--DFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLW---PTVEL------
General information:
TITO was launched using:
RESULT:
Template:
2O5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69579 for 804 contacts (-86.5/contact) +
2D Compatibility (PS) -12111 + (NN) -10841 + (LL) 1412
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -104969.0 ( -130.56 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_2O5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5A-query.scw
PDB file :
Tito_Scwrl_2O5A.pdb
: