Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVLTACGNGMGSSMVIKMKVENALRQLGVSNFESASCSVGEAKGLA-----ANYDIVVASNHLIHELDGRTKGHLVGLDNLMDDNEIKTKLQEIL
2KYR Chain:A ((7-69))
---ALCACPMGLAHTFMAAQALEEAAVEAGYE-VKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEI
General information:
TITO was launched using:
RESULT:
Template:
2KYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23219 for 387 contacts (-60.0/contact) +
2D Compatibility (PS) -6248 + (NN) -634 + (LL) 384
1D Compatibility (HY) -800 + (ID) 500
Total energy: -31017.0 ( -80.15 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_2KYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYR-query.scw
PDB file :
Tito_Scwrl_2KYR.pdb
: