Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFGFLSVLEEELDKHLQYDFAMDWDKKNHTVEVTFILEAQNSSAIETVDDQGETSSEDIVFEDYVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAE------TLNEVATEGLSD---------LMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY
3RI4 Chain:A ((24-84))
--------------------------------------------------------------------------------------------GTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSF-ISWTGDGWEFKLSDPDEVARRWGKRK
General information:
TITO was launched using:
RESULT:
Template:
3RI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6194 for 191 contacts (-32.4/contact) +
2D Compatibility (PS) -5056 + (NN) -4067 + (LL) 6556
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -13061.0 ( -68.38 by residue)
QMean score : 0.178
(partial model without unconserved sides chains):
PDB file :
Tito_3RI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RI4-query.scw
PDB file :
Tito_Scwrl_3RI4.pdb
: