Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLD--IKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRIDD---KTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
2GE3 Chain:A ((7-168))
-TVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIEN-DHPQFVAIADGDVIGWCDIRRQDRATRAHCGTLGMGILPAYRNK--GLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAVSIDGHYIDSLNMAIIFG
General information:
TITO was launched using:
RESULT:
Template:
2GE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45987 for 1131 contacts (-40.7/contact) +
2D Compatibility (PS) -16527 + (NN) -4296 + (LL) 360
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -70650.0 ( -62.47 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_2GE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GE3-query.scw
PDB file :
Tito_Scwrl_2GE3.pdb
: