Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLELVNLHKTFEKGTVNENHVLRGLDLTIEDGDFISVIGGNGAGKSTLLNCIAGLIPIDQGAITLDNQSIT-KDSVEKRSKDISRVFQDPRMGTATNLTIEENMAIAHKRGNK---RHIFRQSVTDDDRQLFKKSLSQLG-LGLENRMKTDAAFLSGGQRQALTLAMATLVRPKLLLLDEHTAALDPKTS----DMVMELTQKVIEEQRLTALMITHNMEHAIAYGNRLVMLYHGKIVVDVKGEA--KRNLTVAELMELFHKNSGQQLIDDALVLG |
| 1GAJ Chain:A ((5-254)) | MEILRTENIVKYF-----GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQ--PLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDQPIAGVAPGLAHDIFNHVLELKAKGI-----TFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIGE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112131 for 1902 contacts (-59.0/contact) +
2D Compatibility (PS) -25357 + (NN) -7551 + (LL) 1496
1D Compatibility (HY) -21200 + (ID) 3650
Total energy: -168393.0 ( -88.53 by residue)
QMean score : 0.492
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