Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEG----KPTGEIVAYKAWFVQEGQDPFQVKFEETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR
2WLV Chain:A ((102-138))
--------------------------IAGTTSTVEEQIQWMFRPQNPVPVGNI--YRRW-IQIGLQKCVRMY--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5233 for 159 contacts (32.9/contact) +
2D Compatibility (PS) -3652 + (NN) -1590 + (LL) 5748
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 3239.0 ( 20.37 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_2WLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WLV-query.scw
PDB file :
Tito_Scwrl_2WLV.pdb
: