Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPKSIVVTVQN---IYYSPLSSSTLKKRAQFMFEIDS
4A8X Chain:B ((656-682))
-----------------------------------------------LLDDLFRKTKGTPCIYWLPLTPEAIAE----------
General information:
TITO was launched using:
RESULT:
Template:
4A8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2639 for 86 contacts (-30.7/contact) +
2D Compatibility (PS) -2810 + (NN) -3016 + (LL) 4276
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -6389.0 ( -74.29 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_4A8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A8X-query.scw
PDB file :
Tito_Scwrl_4A8X.pdb
: