Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYHEWKDLALFYSVESTQKFLEKVYILNGINDAKKNSFKNSERFIYFLKHAESFYKQAAYSPLEIKPILLFYGMAQLIKACLITRDPHYPSHTSVLAHGVTTRKRKKQNYCFSDDEVKIQRNGLCVHFMKHLFGQSDIVDERYTMKKLLMAIPELSDIFYFQQKERFMTKVEKDKNEIFVPEEVVINYKMSDSRFAEYMSHHYQ-----WSFTKKNEHGLLFEISPQDKEPWTSTSLLFDMEKNQYYIPSQREQFLRLPEMTIHYLILYNVGMIARY--------ETEWWYELLTQHISDDYVLIQQFLLVSEKKFPKYASQFLLHF |
| 4FNV Chain:A ((105-243)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQAKADYALVDYRF--HVNNFYEDKETLKPYSVKQDGGINWEYSPKD----ASDEYQKQLHRHQWFIPQAKAYRVSGDEKYIQSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFK-NSVNFTPEWLSTFLVEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28187 for 916 contacts (-30.8/contact) +
2D Compatibility (PS) -12934 + (NN) -328 + (LL) 15052
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -33247.0 ( -36.30 by residue)
QMean score : 0.177
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