Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIPHLDQLVIFAGACQ--SHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN |
4N6F Chain:A ((121-219)) | --------------------------------------------------------------------------------------------------------------------DNAGTVEAARELRAEGMELLPFILPD---LA-TARALEEAGCAALRVMASPVASGR-----------G-IANPAAIRELIEQ---IGIPVVVEGGIGSARHVAEAMELGASATLVNTA---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28465 for 722 contacts (-39.4/contact) +
2D Compatibility (PS) -10587 + (NN) -7660 + (LL) 14040
1D Compatibility (HY) 400 + (ID) 600
Total energy: -32872.0 ( -45.53 by residue)
QMean score : 0.446
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