Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATLTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEGKNAVITLEV-SGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAIGVKNGGVLQQPLYALTVKAK-PKAIPQTIEADISSLDVNEVLTIADLPAGGDYSFNHESDEVVASILPPQQQEAAEVDEEESADAQPEGENEQ
3CF5 Chain:S ((3-175))---LTAKPRTP------KQKLDESMIAAVAYNKEN-NVSFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPPR-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3CF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55596 for 1196 contacts (-46.5/contact) +
2D Compatibility (PS) -18136 + (NN) -4191 + (LL) 2144
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -88579.0 ( -74.06 by residue)
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_3CF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CF5-query.scw
PDB file : Tito_Scwrl_3CF5.pdb: