Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMNDALTSLACSLKPGTTIKGKWNGNTYTLRKQLGKGANGIVYLA--ETSDGHVALKVSD-----DSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDAYIPSANTKVSFYAMEYIKGPLLLKYVSDK--GAEWIPVLMIQLLSSLSVLHQQGWIFGDLKPDNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYW---------GYGTRKAEPSYDLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGN--PLLQKYKKALFSALNGDYQSADEMKKDMLDAGQKAAQRKQPIKASPQPATRQRQQKPRQGKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI |
| 2CDZ Chain:A ((38-253)) | --------------------------------KIGEGSTGIVCIATVR--GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----------VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYG-----PEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65138 for 1423 contacts (-45.8/contact) +
2D Compatibility (PS) -21243 + (NN) -12721 + (LL) 9100
1D Compatibility (HY) -19600 + (ID) 2750
Total energy: -112352.0 ( -78.95 by residue)
QMean score : 0.344
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