Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCP-----FLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISA---GISDKGFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEGSFRLKSHH-------------YLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYGSQS-GEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
| 3U0G Chain:A ((31-310)) | -IWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRDVVRENKLESCYLRPIIWIGSEKLGVSAKG---------NTIHVAIAAWPWG----EEGLAKGIRVKTSS----FTRHHVNVSMVRAKASGWYVNSILANQEATADGYDEALLLDVDGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAKEAGIEVIEKRITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGGGARGPITEKLQSAF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128936 for 1970 contacts (-65.4/contact) +
2D Compatibility (PS) -27288 + (NN) -10144 + (LL) 2324
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -180344.0 ( -91.55 by residue)
QMean score : 0.476
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