Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIAD---ICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGL-DILNRIQKELD-IEV-----EIYEG----DF-EDIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
| 3H87 Chain:A ((17-151)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------TDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGE----IARREFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTH------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54071 for 864 contacts (-62.6/contact) +
2D Compatibility (PS) -12941 + (NN) -5256 + (LL) 21180
1D Compatibility (HY) -800 + (ID) 850
Total energy: -52738.0 ( -61.04 by residue)
QMean score : 0.469
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