Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQS----YTGNRVIVVFDAHL----VKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
3UOB Chain:A ((91-153))
---------------PGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIP----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UOB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16164 for 270 contacts (-59.9/contact) +
2D Compatibility (PS) -5879 + (NN) -1274 + (LL) 10152
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -19665.0 ( -72.83 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3UOB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UOB-query.scw
PDB file :
Tito_Scwrl_3UOB.pdb
: