Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTAHLETK
3WWL Chain:A ((2-33))
-----VGTCPECGAELRLENP-E------LGELVVCEDCGAELE-----
General information:
TITO was launched using:
RESULT:
Template:
3WWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6346 for 160 contacts (39.7/contact) +
2D Compatibility (PS) -3280 + (NN) 1057 + (LL) 1660
1D Compatibility (HY) -800 + (ID) 300
Total energy: 4683.0 ( 29.27 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_3WWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WWL-query.scw
PDB file :
Tito_Scwrl_3WWL.pdb
: