Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDYINKIQQGWFDFDVIVATPDMMGEVG-KIGRVLGPKGLMPNPKTGTVTFEVEKAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAKPAAAKGVYVKNVAVTSTMGPGVKVDSSTFNVK
1ZHO Chain:A ((2-228))
--KHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS----
General information:
TITO was launched using:
RESULT:
Template:
1ZHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109749 for 1803 contacts (-60.9/contact) +
2D Compatibility (PS) -24942 + (NN) -14609 + (LL) 660
1D Compatibility (HY) -17600 + (ID) 6150
Total energy: -172390.0 ( -95.61 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1ZHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZHO-query.scw
PDB file :
Tito_Scwrl_1ZHO.pdb
: