Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKVSHLVSVKEQ
4UY8 Chain:Z ((4-58))
---IKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE-
General information:
TITO was launched using:
RESULT:
Template:
4UY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27913 for 344 contacts (-81.1/contact) +
2D Compatibility (PS) -5733 + (NN) 385 + (LL) 536
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -38075.0 ( -110.68 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_4UY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UY8-query.scw
PDB file :
Tito_Scwrl_4UY8.pdb
: