Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4QBH Chain:A ((1-217))
MNLVLMGLPGAGKGTQAERIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLGKDDCERGFLLDGFPRTVAQAEALEEILEEIGRPIDYVIHIEVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEETVAKRLEVNMKQMKPLLDFYEQKGYLRNVNGQQDMQDVFADVRELLGGLKR
General information:
TITO was launched using:
RESULT:
Template:
4QBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76939 for 1702 contacts (-45.2/contact) +
2D Compatibility (PS) -24062 + (NN) -17617 + (LL) 0
1D Compatibility (HY) -29200 + (ID) 9150
Total energy: -156968.0 ( -92.23 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_4QBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBH-query.scw
PDB file :
Tito_Scwrl_4QBH.pdb
: