Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEAL--VIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQL----AKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE |
| 4O8W Chain:A ((69-178)) | --------------------------------AVKETLQQMLTSDQGKKFWESALKDPKFAESFAKGL--------------QAEHEKMMRALMKDPDYQA------------LMIDILKDPEMEKAMVDVLKSKEFRQHLQKVITETLNSPLYQAKIQDMLMKAAEK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8108 for 440 contacts (-18.4/contact) +
2D Compatibility (PS) -11301 + (NN) -7680 + (LL) 6096
1D Compatibility (HY) -8800 + (ID) 900
Total energy: -30693.0 ( -69.76 by residue)
QMean score : 0.366
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