Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQIVADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL
2O7G Chain:A ((17-91))
----------SAAKGNGRALEAFIKATQQDVWRFVA-YLSDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIR-----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57209 for 506 contacts (-113.1/contact) +
2D Compatibility (PS) -7967 + (NN) -2051 + (LL) 9596
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -64331.0 ( -127.14 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_2O7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O7G-query.scw
PDB file :
Tito_Scwrl_2O7G.pdb
: