Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLIIKGKIDGDVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE |
2N3D Chain:A ((40-86)) | --------------------------------------------------------------------------------------------------------------------------------SLLSADLTIEGGVTG-EGELQIDGVVKGDVRV--GRLTVGETGHVEGSVY------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2N3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19356 for 293 contacts (-66.1/contact) +
2D Compatibility (PS) -5206 + (NN) -1962 + (LL) 11424
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -18700.0 ( -63.82 by residue)
QMean score : 0.583
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