Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATWGVNTCIISLKGLDNA--DDRFVLPEVNTALA----LFPLSIAADCLLMLPCISVVMSISSVMKSVTVE
2POC Chain:A ((292-346))
------------------------------------EQVTARDGRPIVICNEGDAIISVHTTLEVPETVDCLQGLLNVIPLQLISYWL----------------------
General information:
TITO was launched using:
RESULT:
Template:
2POC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11089 for 205 contacts (-54.1/contact) +
2D Compatibility (PS) -4970 + (NN) 513 + (LL) 5576
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -13220.0 ( -64.49 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2POC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2POC-query.scw
PDB file :
Tito_Scwrl_2POC.pdb
: