Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHGQAVFESLYQQIEYISELTNE-FNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHS-KAKKMEVTIEHGDVFIRDDGIGFDRNESSEGLGLKIIEDTCRLLAITYELHTNDNGTGFLFSKE |
3JZ3 Chain:A ((40-208)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------ALLQ-LH-GIDRATRLVDQLLTLSRLDSLDNLQDV-AEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGP----------LGLSIVQRIAKLHGMNVEFGNAEQG-GF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61971 for 956 contacts (-64.8/contact) +
2D Compatibility (PS) -15301 + (NN) -7555 + (LL) 15912
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -80965.0 ( -84.69 by residue)
QMean score : 0.407
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