Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIICLKKSSKRLSTSQAVLVTDIADTG-ITAAAGADIIAATAAVRAKEDTTTVMAAVIVTNAGATAAVNPKKVLVPLLGQGFFYVTD
3AD9 Chain:A ((298-359))
-------------------LVSELAASGGVVAVIDARQNISAAAAQAVTDGVTVLTGSVVANTEADASGELSAVLVATLDE-------
General information:
TITO was launched using:
RESULT:
Template:
3AD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21096 for 323 contacts (-65.3/contact) +
2D Compatibility (PS) -6092 + (NN) 2959 + (LL) 1984
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -25645.0 ( -79.40 by residue)
QMean score : 0.046
(partial model without unconserved sides chains):
PDB file :
Tito_3AD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AD9-query.scw
PDB file :
Tito_Scwrl_3AD9.pdb
: