Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTDILAQTPYVLKQLRPTKAKKEKEKVRFQQEIKLLKNIHHPQIPGFIDEFIIDGQAYYVMQFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDIRTPNIII----NDGRLCLIDFGLAKQLTPEEMEEIKVRKQDDFFDLGETLLFLLYSQYKGKKKKNGTWLEELTLTKEVTLLLKRLLGIEEEYQHTASIREDLNRAIQSVT
3V51 Chain:A ((22-182))
------------------AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3V51.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116529 for 1031 contacts (-113.0/contact) +
2D Compatibility (PS) -16511 + (NN) -8971 + (LL) 8616
1D Compatibility (HY) -13600 + (ID) 2350
Total energy: -149345.0 ( -144.85 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3V51.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V51-query.scw
PDB file :
Tito_Scwrl_3V51.pdb
: