Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVTLGYLRESLSNHLENEVCQRICKKMLAKRYANEEEFVKDLDDNEMSFLNH-----------VLEKEIKYAQNEQDQKRAKELNEVYELLL
2VGM Chain:A ((229-289))-------------------------------QYAEEEHNKKILDNKGMFFIAHCSTGYLQGINEVLKNPL-YASKLQDTKYSKEIMVMDEFLL


General information:
TITO was launched using:
RESULT:

Template: 2VGM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9149 for 228 contacts (40.1/contact) +
2D Compatibility (PS) -5153 + (NN) -754 + (LL) 2752
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: 494.0 ( 2.17 by residue)
QMean score : 0.423

(partial model without unconserved sides chains):
PDB file : Tito_2VGM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VGM-query.scw
PDB file : Tito_Scwrl_2VGM.pdb: