Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAIERSGYTFQPEFSVVRQ-NGAIHVYHQGEFVEEIEFEFNGEYPDHDLIEELVNHYCFEHEI
4RV7 Chain:A ((139-173))
----------------VVSEETGGISLTKGGELFRDVS---------EEELHKILLKELV----
General information:
TITO was launched using:
RESULT:
Template:
4RV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22361 for 162 contacts (-138.0/contact) +
2D Compatibility (PS) -3651 + (NN) -519 + (LL) 1404
1D Compatibility (HY) -3600 + (ID) 300
Total energy: -29027.0 ( -179.18 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_4RV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RV7-query.scw
PDB file :
Tito_Scwrl_4RV7.pdb
: