Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQ---------KLLLSGLAVSTV----GITSYLLKDP----SNRQKAREFIHSMK--MKITKQPDMETFPVD---KAGHPDPQDIEDNKMVSEGSMYPVQYYDEKKK
2H2M Chain:A ((1-108))MAAGELEGGKPLSGLLNALAQDTFHGYPGITEELLRSQLYPEVPPEEFRPFLAKMRGILKSIASADMDFNQLEAFLTAQTKKQGGITSDQAAVISKFWKSHKTKIRES


General information:
TITO was launched using:
RESULT:

Template: 2H2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 229 -18486 -80.72 -214.95
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -80.72
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_2H2M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H2M-query.scw
PDB file : Tito_Scwrl_2H2M.pdb: