Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLFTNGKVLWGAVIAAFILSIVFYPFLPTQMPIHYDVA--NSPDLTVNKLAGTVMLPVLMVVFAWARKINWQFVFAVYILLICHIVVLCLAL
4M6B Chain:C ((598-628))----------------------------SVGLSALFDLDLDDSEDFTVNSS------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 6 -1806 -301.00 -86.00
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.36

3D Compatibility (PKB) : -301.00
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.36
QMean score : 0.220

(partial model without unconserved sides chains):
PDB file : Tito_4M6B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M6B-query.scw
PDB file : Tito_Scwrl_4M6B.pdb: