Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLITVPLAGELKFYPLNEEFRVSFGAPVFFFFLSLLRHVPAVLPGFLTGAAVFIFRVFLELWGGGHNGLTPILYDQASGFFFYMTYACLFSILKANRFRERPIMLGFIGFMIEVVSDCVELTVQFLIFHTVVTPEKITDIAVIAISHTFIVMSFYSVLKLYETQSREKQTRQQHEHMLMIVSNLYEETVHLKKTLKTTEKVTNDSYQLYREMKGKDVQLSGRILRLAGEIHEVKKDNQRIFAGLSKLISNESLRDYMRASDLLQLVIRMNEKYAEALGKQIDFYCSIEGEHDEY-HVFI------VLSIINNLTANAVEAMDEE--------GMVSLRLRKPNESMVEFQVEDNGPGIS------------------------EKIGDIVFDPGFTSKYDEFGTPSTGIGLSYVKEIVTELEGDITFDNQQ-RGVVFAIRLPVRHLIQKG
1I5D Chain:A ((18-190))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMVRDLAKKMNKEVNFI--MRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVV-IEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRLPL-------


General information:
TITO was launched using:
RESULT:

Template: 1I5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 541 -65731 -121.50 -494.22
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -121.50
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_1I5D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1I5D-query.scw
PDB file : Tito_Scwrl_1I5D.pdb: