Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK-VLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVM--ELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLV
2PH3 Chain:A ((2-241))----RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNA--GITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP--QEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG-----


General information:
TITO was launched using:
RESULT:

Template: 2PH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1323 -145583 -110.04 -614.27
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -110.04
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_2PH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PH3-query.scw
PDB file : Tito_Scwrl_2PH3.pdb: