Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFFKKLAASAGIGAAKVDTILEKDAYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYVIVKDDEE-----HRKYATIHSFRVT-------------GSFTIQPGEEHQFPFTFTLPLDTPITV------------GKVEVAVVTD---LDIQGGIDKSDHDRIFVEAHPWIENVLEAIENLGFRLNEADCEQAPYFQRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELEDTEELEEVLEEILDQYAE
4ZWJ Chain:A ((2035-2185))-------------------------HVSQVEPVDGVVLVDPE--LVKGKKVYVTLTCAFRYGQEDIDVMGLTFRRDLYFSRVQVYPPVGAMSVLTQLQESLLKKLGD-NTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEVKAFASDITDPEEDKIPKKSSVRLLIRKVQHAP-------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 393 -41035 -104.41 -356.82
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -104.41
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_4ZWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZWJ-query.scw
PDB file : Tito_Scwrl_4ZWJ.pdb: