Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYVVYDSEGEHTKVLAEAIAEGARENDAAEVFIDHVDQADIRKLKDMDAIIWGCPGHFGTISSGLKTWIDR-LGYLWAEGELINKVGAVFCTTATTHGGLEMTMHNLITPMFHQGMIVVGLPGNVPENALYGSYYGAGVTCPVDSDELMSEEGIQLGRALGRRVSQVTGNLTAGQ
2ARK Chain:A ((6-172))-KVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLGDLW--GEIDGKIACAFSSSGGWGGGNEVACMSILTMLMNFGFLVFGVTDYVGKK--FTLHYGAVV-----AGEPRSEEEKEACRRLGRRLAEWVAIFVDGR


General information:
TITO was launched using:
RESULT:

Template: 2ARK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 987 -124489 -126.13 -749.93
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -126.13
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_2ARK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ARK-query.scw
PDB file : Tito_Scwrl_2ARK.pdb: