Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFLSPVFVFYHLRKEGKSQLWLYNPNGGLWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSVKNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFHSLRNWRGMRWAAMVLLVAMWLFF---DEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLLIMASKLLDRKVEV-
1EJH Chain:A ((5-190))---------------------------------------------------EHYIKHPLQNRWALWFFKNDK--SKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEK---------NKRG----------GRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKER--LGLPPKIVIGYQSHADTAT---KNRFVV


General information:
TITO was launched using:
RESULT:

Template: 1EJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 821 -126491 -154.07 -718.70
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -154.07
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.120

(partial model without unconserved sides chains):
PDB file : Tito_1EJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EJH-query.scw
PDB file : Tito_Scwrl_1EJH.pdb: