Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKIYVLDTNVLLQDPNAIFSFEENEVVIPAVVLEEVDSKKRYMDEVGRNARHVSKLIDALRQKGRLHEHVPLDTGGTLRIELNHRSFHQLQEIFIEKTNDNRILAVAKNLSLEEETKENGRPVILVSKDVLVRVKADAIGLLAEDFLNDRVVDNDEMYSGYKDLYISQQLFSSFYGKNQISVNDVKQHAFYPNQFALMKDELGGSSSAVGIADKTGTVLKRLVFDDEHIWGIRPKNVQQTMALELLLREDIPLVTLIGKAGTGKTLLA--LAAGLLQTEDLGIYKKLVVARPIVPVGKDIGYLPGEKEEKLKPWMQPIFDNLEFLFNAKKPGELDAILAGIGSIQVEALTYIRGRSIPD----QFIIIDEAQNLTRHEVKTLLTRVGEGSKIVLMGDPEQIDHPYLDSLNNGLAYVVERFKGQPISGSVKLLKGERSGLAQLAADLL
3UPU Chain:A ((41-167))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKEKKHHVTINGPAGTGATTLTKFIIEALISTGETGI----ILAAPTHAAKKILSKLSG-----------------------KEASTIHSILK-INPVTYEENVLFEQKEVPDLAKCRVLICDEVSMYDRKLFKILLSTIPPWCTIIGIGDNKQI----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3UPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 460 -63216 -137.43 -522.44
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -137.43
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_3UPU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UPU-query.scw
PDB file : Tito_Scwrl_3UPU.pdb: