Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVIKGLTAGLIFLFLCACGGQQIKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-NIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVI-HQSSFYLVGPDGKVL----KDYNGVENTPYDDIISDVKSASTLK
2B7J Chain:A ((23-180))---------------------------------PFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILG---LTG-TFDEVKN-ACKKYRVY----------VDHSIFFYLMDPEGQFVDALGRNYD--EKTGVDKIVEHVKS-----


General information:
TITO was launched using:
RESULT:

Template: 2B7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 644 -23179 -35.99 -167.96
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -35.99
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_2B7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B7J-query.scw
PDB file : Tito_Scwrl_2B7J.pdb: