Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLKKQTVWLLTMLSLVVVLSVYYIMSPESKNAVQMQSEKSASDSGEVATEKAPAKQDTKEKSGTETEKGKEDGTKGTKDSSADKETSAEASEKGTVVTETADDDLFTTYRLDLEDARSKEREELNAIVSSDDATAKEKSEAYDKMTALSEVEGTEKQLETLIKT-QGYEDALVNAE---------G----DKINITVKS--DKHSKSKATAIIDLVAKEI-KTMKD-VAVTFEPSK 2Y9J Chain:Y ((101-188)) -------------------------------------------------------------------------------------------------------------------------------------------------EKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPLAHQISDIKRFLKNSFADVDYDNISVVLS---

General information: TITO was launched using: RESULT: Template: 2Y9J.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain Y - contact count / total energy / energy per contact / energy per residue : 171 12498 73.08 178.54 target 2D structure prediction score : 0.67 Monomeric hydrophicity matching model chain Y : 0.62 3D Compatibility (PKB) : 73.08 2D Compatibility (Sec. Struct. Predict.) : 0.67 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.706

(partial model without unconserved sides chains): PDB file : Tito_2Y9J.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2Y9J-query.scw PDB file : Tito_Scwrl_2Y9J.pdb: