Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAVTYQGIKNVVVKDVPDPKIEKSDDMIIKVTSTAICGSDLHLIHGFIPNMQEDY--VIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQCDQ--SNDNGEMGA----YFGYSGQTGGYPGGQAEYLRVPFAN-FTHFKIPESCEEPDEKLSVIADAMTTGF-WSVDNAGVKKGDTVIVLGCGPVGLFAQKFCWLKGAKRVIAVDYVNYRLQHAKRTNKVEIVNFEDH-ENTGNYLKEITKGGADVVIDAVGMDGKMSDLEFLASGLKLHGGTMSALVIASQAVRKGGTIQITGVYGGRYNGFPLGDIMQRNVNIRSGQAPVIHYMPYMFELVSTGKIDPGDVVSHVLPLSEAKHGYDIFDSKMDDCIKVVLKP
1CDO Chain:A ((12-372))--AVAWEANKPLVIEEI-EVDVPHANEIRIKIIATGVCHTDLY--HLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPS--APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNA--LESCLK---GWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKD------------GVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLM--KHGKCIRTVL--


General information:
TITO was launched using:
RESULT:

Template: 1CDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2155 -18799 -8.72 -53.71
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -8.72
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.423

(partial model without unconserved sides chains):
PDB file : Tito_1CDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CDO-query.scw
PDB file : Tito_Scwrl_1CDO.pdb: