Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDVVNIVVWSKKGCSYCEEVKNYLNEKGFPFQNIDVSEKE---KLRDILQVKYGVRHVPVVEIGRGNQYQGITEIGIEHLD---LALANHAQIKEAKR
2CQ9 Chain:A ((29-120))------VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV-NGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSKR


General information:
TITO was launched using:
RESULT:

Template: 2CQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 328 -22873 -69.73 -265.96
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -69.73
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_2CQ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CQ9-query.scw
PDB file : Tito_Scwrl_2CQ9.pdb: