Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQSKQLVRLI-EIAIMTAAAVILDIVSGMFLSMPQGGSVSIMMIPIFLISFRWGVKAGLTTGLLTGLVQIAIGNLFAQHPVQLLLDYIVAFAAIGISGCFASSVRKAAVSKTKGKLIVSVVSAVFIGSLLRYAAHVISGAVFFGSFAPKGTPVWIYSLTYNATYMVPSFIICAIVLCLLFMTAPRLLKSDKA
4MUU Chain:B ((16-186))-----FNVRLLTEIAFMAALAFIISLIPN---TVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLVAPVSLGIAGLFR--------QKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFPKL------


General information:
TITO was launched using:
RESULT:

Template: 4MUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 760 -161164 -212.06 -948.02
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -212.06
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_4MUU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MUU-query.scw
PDB file : Tito_Scwrl_4MUU.pdb: