Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKKPAALIILDGFGLRNETVGNAVALAKKPNFDRYWNQYPHQTLTASGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDAISNAKENNKALHLFGLLSDGGVHSHINHLFALLKLAKKEGLTKVYIHGFLDGRDVGPQTAKTYINQLNDQIKEIGVGEIASISGRYYSMDRDKRWDRVEKAYRAMAYGEGPSYRSALDVVDDSYANGIYDEFVIPSVITKENGEPVAKIQDGDSVIFYNFRPDRAIQISNTFTNKDFRDFDRGENYPKNLYFVCLTHFSETVDGYVAFKPINLDNTVGEVLSQHGLKQLRIAETEKYPHVTFFMSGGREAEFPGEERILINSPKVATYDLKPEMSAYEVKDALVKEIEADKHDAIILNFANPD-MVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADILITESGEPHTAHTTNPVPVIVTKEGITLREGG-------ILGDLAPTLLDLLGVEKPKEMTGTSLIQK
3M8Y Chain:A ((269-396))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKLVDTLNMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVF-AKLKEDDLLLITADHGNDPI------HPGTDHTREYVPLLAYSP--SMKEGGQELPLRQTFADIGATVAENFGVKMPE--YGTSFLNE


General information:
TITO was launched using:
RESULT:

Template: 3M8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 307 -14351 -46.75 -119.59
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -46.75
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_3M8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M8Y-query.scw
PDB file : Tito_Scwrl_3M8Y.pdb: